node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Tpau_1566 | rnc | Tpau_1566 | Tpau_1567 | PFAM: protein of unknown function DUF177; KEGG: nfa:nfa41860 hypothetical protein. | Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism. | 0.946 |
Tpau_1566 | rplM | Tpau_1566 | Tpau_0869 | PFAM: protein of unknown function DUF177; KEGG: nfa:nfa41860 hypothetical protein. | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.810 |
Tpau_1566 | rplQ | Tpau_1566 | Tpau_3381 | PFAM: protein of unknown function DUF177; KEGG: nfa:nfa41860 hypothetical protein. | Ribosomal protein L17; KEGG: rsa:RSal33209_2116 50S ribosomal protein L17; TIGRFAM: ribosomal protein L17; PFAM: ribosomal protein L17. | 0.586 |
Tpau_1566 | rplS | Tpau_1566 | Tpau_1630 | PFAM: protein of unknown function DUF177; KEGG: nfa:nfa41860 hypothetical protein. | Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.778 |
Tpau_1566 | rpmA | Tpau_1566 | Tpau_1474 | PFAM: protein of unknown function DUF177; KEGG: nfa:nfa41860 hypothetical protein. | Ribosomal protein L27; KEGG: rha:RHA1_ro01312 50S ribosomal protein L27; TIGRFAM: ribosomal protein L27; PFAM: ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family. | 0.759 |
Tpau_1566 | rpmF | Tpau_1566 | Tpau_3288 | PFAM: protein of unknown function DUF177; KEGG: nfa:nfa41860 hypothetical protein. | KEGG: mul:MUL_4702 50S ribosomal protein L32; TIGRFAM: ribosomal protein L32; PFAM: ribosomal L32p protein; Belongs to the bacterial ribosomal protein bL32 family. | 0.859 |
Tpau_1566 | rpsF | Tpau_1566 | Tpau_4169 | PFAM: protein of unknown function DUF177; KEGG: nfa:nfa41860 hypothetical protein. | Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. | 0.825 |
Tpau_1566 | rpsI | Tpau_1566 | Tpau_0870 | PFAM: protein of unknown function DUF177; KEGG: nfa:nfa41860 hypothetical protein. | PFAM: ribosomal protein S9; KEGG: rop:ROP_62310 30S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family. | 0.556 |
Tpau_1566 | rpsO | Tpau_1566 | Tpau_1734 | PFAM: protein of unknown function DUF177; KEGG: nfa:nfa41860 hypothetical protein. | Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.633 |
Tpau_1566 | rpsP | Tpau_1566 | Tpau_1617 | PFAM: protein of unknown function DUF177; KEGG: nfa:nfa41860 hypothetical protein. | KEGG: msm:MSMEG_2435 30S ribosomal protein S16; TIGRFAM: ribosomal protein S16; PFAM: ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family. | 0.827 |
rnc | Tpau_1566 | Tpau_1567 | Tpau_1566 | Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism. | PFAM: protein of unknown function DUF177; KEGG: nfa:nfa41860 hypothetical protein. | 0.946 |
rnc | rplM | Tpau_1567 | Tpau_0869 | Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism. | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.952 |
rnc | rplQ | Tpau_1567 | Tpau_3381 | Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism. | Ribosomal protein L17; KEGG: rsa:RSal33209_2116 50S ribosomal protein L17; TIGRFAM: ribosomal protein L17; PFAM: ribosomal protein L17. | 0.945 |
rnc | rplS | Tpau_1567 | Tpau_1630 | Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism. | Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.956 |
rnc | rpmA | Tpau_1567 | Tpau_1474 | Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism. | Ribosomal protein L27; KEGG: rha:RHA1_ro01312 50S ribosomal protein L27; TIGRFAM: ribosomal protein L27; PFAM: ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family. | 0.955 |
rnc | rpmF | Tpau_1567 | Tpau_3288 | Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism. | KEGG: mul:MUL_4702 50S ribosomal protein L32; TIGRFAM: ribosomal protein L32; PFAM: ribosomal L32p protein; Belongs to the bacterial ribosomal protein bL32 family. | 0.949 |
rnc | rpsF | Tpau_1567 | Tpau_4169 | Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism. | Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. | 0.945 |
rnc | rpsI | Tpau_1567 | Tpau_0870 | Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism. | PFAM: ribosomal protein S9; KEGG: rop:ROP_62310 30S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family. | 0.957 |
rnc | rpsO | Tpau_1567 | Tpau_1734 | Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism. | Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome. | 0.971 |
rnc | rpsP | Tpau_1567 | Tpau_1617 | Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism. | KEGG: msm:MSMEG_2435 30S ribosomal protein S16; TIGRFAM: ribosomal protein S16; PFAM: ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family. | 0.943 |