Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tpau_1574PFAM: protein of unknown function DUF350; KEGG: nfa:nfa41700 hypothetical protein. (149 aa)    
Predicted Functional Partners:
Tpau_1573
PFAM: glutathionylspermidine synthase; KEGG: nfa:nfa41710 hypothetical protein.
 
   0.948
Tpau_1572
KEGG: ami:Amir_0114 hypothetical protein.
 
     0.941
Tpau_1570
PFAM: OsmC family protein; KEGG: rha:RHA1_ro06525 hypothetical protein.
       0.799
Tpau_1571
PFAM: acylphosphatase; KEGG: nfa:nfa41730 putative acylphosphatase.
       0.792
Tpau_1575
KEGG: rop:ROP_58200 hypothetical protein.
       0.772
Tpau_1569
PFAM: protein of unknown function DUF1648; KEGG: kra:Krad_2624 protein of unknown function DUF1648.
       0.565
Tpau_0144
KEGG: mab:MAB_2775c hypothetical protein.
  
     0.552
Tpau_0367
PFAM: protein of unknown function DUF1396; KEGG: mjl:Mjls_2429 hypothetical protein.
  
     0.546
Tpau_0564
KEGG: rop:ROP_43280 hypothetical membrane protein.
  
     0.511
Tpau_1581
PFAM: polysaccharide biosynthesis protein; KEGG: rha:RHA1_ro05738 MOP superfamily O-antigen transporter.
 
     0.494
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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