Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tpau_1577PFAM: glycosyl transferase group 1; KEGG: rha:RHA1_ro05732 hypothetical protein. (371 aa)    
Predicted Functional Partners:
Tpau_1580
PFAM: glycosyl transferase group 1; KEGG: mab:MAB_1018c glycosyl transferase.
    
0.970
Tpau_1579
PFAM: glycosyl transferase group 1; KEGG: mab:MAB_1019c glycosyl transferase.
 
     0.909
Tpau_1581
PFAM: polysaccharide biosynthesis protein; KEGG: rha:RHA1_ro05738 MOP superfamily O-antigen transporter.
 
  
 0.838
Tpau_1582
KEGG: mab:MAB_1016c hypothetical protein.
 
    0.788
Tpau_1576
PFAM: phosphopantetheine-binding; KEGG: rer:RER_43060 acyl carrier protein.
       0.773
Tpau_1578
PFAM: condensation domain protein; KEGG: pde:Pden_2564 enterobactin synthase subunit F.
     
 0.773
Tpau_1584
PFAM: lipopolysaccharide biosynthesis protein; KEGG: rha:RHA1_ro05735 protein-tyrosine kinase, C- terminal.
  
  
 0.770
Tpau_1583
KEGG: rha:RHA1_ro05736 hypothetical protein.
       0.723
Tpau_1585
KEGG: rer:RER_42890 hypothetical protein.
       0.723
Tpau_1586
KEGG: rha:RHA1_ro05734 mannuronan epimerase.
       0.723
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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