Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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textmining
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
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[Homology]
Score
Tpau_1591KEGG: msm:MSMEG_2184 amino acid permease; TIGRFAM: permease, urea carboxylase system; PFAM: amino acid permease-associated region. (513 aa)    
Predicted Functional Partners:
Tpau_1592
KEGG: msm:MSMEG_2185 hypothetical protein; TIGRFAM: urea carboxylase-associated protein 2; PFAM: Domain of unknown function DUF1989.
 
   
 0.887
Tpau_1593
KEGG: msm:MSMEG_2186 hypothetical protein; TIGRFAM: urea carboxylase-associated protein 1; PFAM: Domain of unknown function DUF1989.
 
   
 0.840
Tpau_1595
KEGG: msm:MSMEG_2189 allophanate hydrolase; TIGRFAM: allophanate hydrolase; PFAM: Amidase.
 
 
 
 0.834
Tpau_1594
Urea amidolyase related protein; SMART: Allophanate hydrolase subunit 2; Allophanate hydrolase subunit 1; TIGRFAM: urea amidolyase related protein; KEGG: msm:MSMEG_2187 UreA amidolyase; PFAM: Allophanate hydrolase subunit 2; Allophanate hydrolase subunit 1.
 
     0.833
Tpau_1596
6-phosphogluconate dehydrogenase, decarboxylating; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.
     
 0.540
Tpau_1590
Transcriptional regulator, TetR family; PFAM: regulatory protein TetR; KEGG: msm:MSMEG_4300 transcription regulator AmtR.
       0.534
Tpau_1597
PFAM: GCN5-related N-acetyltransferase; KEGG: bcv:Bcav_3843 GCN5-related protein N- acetyltransferase.
       0.521
Tpau_3953
PFAM: amino acid permease-associated region; KEGG: rop:ROP_43930 putative amino acid transporter.
  
   
 0.459
glgE
Alpha amylase catalytic region; Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1->4)-glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB.
   
 0.425
Tpau_1390
Alpha amylase catalytic region; KEGG: rha:RHA1_ro01389 alpha-glucosidase; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain.
   
 0.425
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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