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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
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[Homology]
Score
Tpau_1595KEGG: msm:MSMEG_2189 allophanate hydrolase; TIGRFAM: allophanate hydrolase; PFAM: Amidase. (554 aa)    
Predicted Functional Partners:
Tpau_1594
Urea amidolyase related protein; SMART: Allophanate hydrolase subunit 2; Allophanate hydrolase subunit 1; TIGRFAM: urea amidolyase related protein; KEGG: msm:MSMEG_2187 UreA amidolyase; PFAM: Allophanate hydrolase subunit 2; Allophanate hydrolase subunit 1.
  
 0.999
Tpau_1592
KEGG: msm:MSMEG_2185 hypothetical protein; TIGRFAM: urea carboxylase-associated protein 2; PFAM: Domain of unknown function DUF1989.
 
   
 0.962
Tpau_1593
KEGG: msm:MSMEG_2186 hypothetical protein; TIGRFAM: urea carboxylase-associated protein 1; PFAM: Domain of unknown function DUF1989.
 
   
 0.962
ureC
TIGRFAM: urease, alpha subunit; KEGG: sgr:SGR_236 urease subunit alpha; PFAM: amidohydrolase; Urease alpha-subunit domain protein.
     
  0.900
Tpau_3410
KEGG: rer:RER_47990 urease beta subunit; TIGRFAM: urease, beta subunit; PFAM: Urease beta subunit.
     
  0.900
Tpau_3411
TIGRFAM: urease, gamma subunit; KEGG: rer:RER_48000 urease gamma subunit; PFAM: Urease gamma subunit region; Belongs to the urease gamma subunit family.
     
  0.900
Tpau_3320
PFAM: Carbamoyl-phosphate synthase L chain ATP- binding; biotin carboxylase domain protein; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; biotin/lipoyl attachment domain-containing protein; Carbamoyl-phosphate synthetase large chain domain protein; KEGG: mgi:Mflv_2553 carbamoyl-phosphate synthase L chain, ATP-binding.
    
 0.875
gatB
glutamyl-tRNA(Gln) amidotransferase, B subunit; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily.
 
 
 0.867
gatC
glutamyl-tRNA(Gln) amidotransferase, C subunit; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family.
  
 
 0.861
Tpau_1591
KEGG: msm:MSMEG_2184 amino acid permease; TIGRFAM: permease, urea carboxylase system; PFAM: amino acid permease-associated region.
 
 
 
 0.834
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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