Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tpau_1597PFAM: GCN5-related N-acetyltransferase; KEGG: bcv:Bcav_3843 GCN5-related protein N- acetyltransferase. (190 aa)    
Predicted Functional Partners:
Tpau_1596
6-phosphogluconate dehydrogenase, decarboxylating; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.
       0.752
Tpau_1595
KEGG: msm:MSMEG_2189 allophanate hydrolase; TIGRFAM: allophanate hydrolase; PFAM: Amidase.
  
    0.528
Tpau_1591
KEGG: msm:MSMEG_2184 amino acid permease; TIGRFAM: permease, urea carboxylase system; PFAM: amino acid permease-associated region.
       0.521
Tpau_1592
KEGG: msm:MSMEG_2185 hypothetical protein; TIGRFAM: urea carboxylase-associated protein 2; PFAM: Domain of unknown function DUF1989.
       0.521
Tpau_1593
KEGG: msm:MSMEG_2186 hypothetical protein; TIGRFAM: urea carboxylase-associated protein 1; PFAM: Domain of unknown function DUF1989.
       0.521
Tpau_1594
Urea amidolyase related protein; SMART: Allophanate hydrolase subunit 2; Allophanate hydrolase subunit 1; TIGRFAM: urea amidolyase related protein; KEGG: msm:MSMEG_2187 UreA amidolyase; PFAM: Allophanate hydrolase subunit 2; Allophanate hydrolase subunit 1.
       0.521
Tpau_1408
KEGG: nca:Noca_2964 HhH-GPD family protein; TIGRFAM: HhH-GPD family protein; PFAM: HhH-GPD family protein.
 
     0.417
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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