STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tpau_1647PFAM: transposase IS3/IS911 family protein; KEGG: nca:Noca_2153 transposase IS3/IS911 family protein. (109 aa)    
Predicted Functional Partners:
Tpau_1648
PFAM: Integrase catalytic region; KEGG: mva:Mvan_0583 integrase catalytic subunit.
 
    0.868
Tpau_1646
KEGG: saq:Sare_1262 acyltransferase PapA5.
       0.552
Tpau_3218
PFAM: Integrase catalytic region; KEGG: mva:Mvan_0583 integrase catalytic subunit.
 
    0.444
Tpau_0268
PFAM: Integrase catalytic region; KEGG: mva:Mvan_0583 integrase catalytic subunit.
 
    0.442
Tpau_0272
PFAM: Integrase catalytic region; KEGG: mva:Mvan_0583 integrase catalytic subunit.
 
    0.442
Tpau_0279
PFAM: Integrase catalytic region; KEGG: mva:Mvan_0583 integrase catalytic subunit.
 
    0.442
Tpau_1666
PFAM: Integrase catalytic region; KEGG: mva:Mvan_0583 integrase catalytic subunit.
 
    0.442
Tpau_2473
PFAM: Integrase catalytic region; KEGG: mva:Mvan_0583 integrase catalytic subunit.
 
    0.442
Tpau_2606
PFAM: Integrase catalytic region; KEGG: mva:Mvan_0583 integrase catalytic subunit.
 
    0.442
Tpau_0302
PFAM: Integrase catalytic region; KEGG: mva:Mvan_0583 integrase catalytic subunit.
 
    0.440
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.