Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tpau_1690PFAM: penicillin-binding protein transpeptidase; NTF2 domain protein transpeptidase; KEGG: rop:ROP_66260 putative penicillin-binding protein. (612 aa)    
Predicted Functional Partners:
Tpau_3939
Peptidoglycan glycosyltransferase; PFAM: glycosyl transferase family 51; PASTA domain containing protein; penicillin-binding protein transpeptidase; KEGG: rer:RER_04630 penicillin-binding protein 1; SMART: PASTA domain containing protein.
 
 
 
 0.815
Tpau_2647
KEGG: rer:RER_35530 cell division protein FtsW; TIGRFAM: cell division protein FtsW; PFAM: cell cycle protein; Belongs to the SEDS family.
 
 
 0.722
Tpau_0030
PFAM: cell cycle protein; KEGG: nfa:nfa830 putative cell division protein; Belongs to the SEDS family.
 
 
 0.710
Tpau_2644
Polypeptide-transport-associated domain protein FtsQ-type; Essential cell division protein.
  
 
 0.634
Tpau_4192
Peptidoglycan glycosyltransferase; KEGG: nfa:nfa55570 putative penicillin-binding protein; PFAM: glycosyl transferase family 51; penicillin- binding protein transpeptidase.
 
 
 
 0.622
Tpau_1691
PFAM: GCN5-related N-acetyltransferase; KEGG: rer:RER_19660 hypothetical protein.
       0.618
Tpau_0657
KEGG: rer:RER_16250 hypothetical protein.
  
     0.588
Tpau_4225
Glycoprotein; KEGG: rha:RHA1_ro03643 glycoprotein.
  
     0.569
map
Methionine aminopeptidase, type I; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.
     
 0.539
cobQ
Cobyric acid synthase CobQ; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily.
       0.533
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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