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Tpau_1705 protein (Tsukamurella paurometabola) - STRING interaction network
"Tpau_1705" - PFAM: major facilitator superfamily MFS_1 in Tsukamurella paurometabola
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tpau_1705PFAM- major facilitator superfamily MFS_1; KEGG- rha-RHA1_ro06618 major facilitator superfamily multidrug transporter (733 aa)    
Predicted Functional Partners:
Tpau_2255
PFAM- major facilitator superfamily MFS_1; KEGG- sco-SCO7346 membrane transport protein (480 aa)
   
          0.727
Tpau_1514
PFAM- major facilitator superfamily MFS_1; KEGG- bmj-BMULJ_05434 major facilitator family transporter (393 aa)
   
          0.670
Tpau_2703
PFAM- major facilitator superfamily MFS_1; KEGG- rop-ROP_05990 putative drug resistance efflux protein (376 aa)
   
          0.650
Tpau_0456
PFAM- major facilitator superfamily MFS_1; KEGG- bcj-BCAM1381 major facilitator superfamily protein (409 aa)
   
          0.624
Tpau_1704
KEGG- rop-ROP_66540 putative MFS transporter; TIGRFAM- drug resistance transporter, EmrB/QacA subfamily; PFAM- major facilitator superfamily MFS_1 (757 aa)
 
       
0.566
Tpau_0209
PFAM- major facilitator superfamily MFS_1; KEGG- art-Arth_3774 major facilitator transporter (452 aa)
   
          0.412
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola DSM20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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