STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tpau_1705PFAM: major facilitator superfamily MFS_1; KEGG: rha:RHA1_ro06618 major facilitator superfamily multidrug transporter. (733 aa)    
Predicted Functional Partners:
Tpau_1514
PFAM: major facilitator superfamily MFS_1; KEGG: bmj:BMULJ_05434 major facilitator family transporter.
  
     0.735
Tpau_2255
PFAM: major facilitator superfamily MFS_1; KEGG: sco:SCO7346 membrane transport protein.
  
     0.721
Tpau_2703
PFAM: major facilitator superfamily MFS_1; KEGG: rop:ROP_05990 putative drug resistance efflux protein.
  
     0.687
Tpau_0456
PFAM: major facilitator superfamily MFS_1; KEGG: bcj:BCAM1381 major facilitator superfamily protein.
  
     0.639
Tpau_1536
TIGRFAM: asparagine synthase (glutamine- hydrolyzing); KEGG: nfa:nfa17070 putative asparagine synthetase; PFAM: asparagine synthase; glutamine amidotransferase class-II.
      
 0.593
Tpau_0209
PFAM: major facilitator superfamily MFS_1; KEGG: art:Arth_3774 major facilitator transporter.
  
     0.554
Tpau_1703
uroporphyrin-III C-methyltransferase; KEGG: nfa:nfa40770 putative uroporphyrinogen III methylase; TIGRFAM: uroporphyrin-III C-methyltransferase; siroheme synthase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase.
       0.538
Tpau_1704
KEGG: rop:ROP_66540 putative MFS transporter; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1.
 
    
0.521
cobB-3
Cobyrinic acid a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of hydrogenobyrinate, using either L- glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family.
       0.487
Tpau_1701
TIGRFAM: cob(I)alamin adenosyltransferase; KEGG: rer:RER_26070 cob(I)alamin adenosyltransferase; PFAM: ATP:corrinoid adenosyltransferase BtuR/CobO/CobP.
       0.485
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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