Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tpau_1747PFAM: Pirin domain protein; KEGG: rer:RER_49560 hypothetical protein; Belongs to the pirin family. (241 aa)    
Predicted Functional Partners:
Tpau_1746
PFAM: Amidohydrolase 3; amidohydrolase; KEGG: rer:RER_47290 hypothetical protein.
       0.765
Tpau_1745
PFAM: permease for cytosine/purines uracil thiamine allantoin; KEGG: aau:AAur_3952 putative cytosine/purine/uracil/thiamine/allantoin permease family protein; Belongs to the purine-cytosine permease (2.A.39) family.
       0.762
Tpau_1748
KEGG: kra:Krad_4427 hypothetical protein.
       0.603
Tpau_3264
PFAM: Extradiol ring-cleavage dioxygenase class III protein subunit B; KEGG: rha:RHA1_ro01018 hypothetical protein.
 
  
 0.552
Tpau_1744
KEGG: mab:MAB_3099c AsnC family transcriptional regulator; PFAM: Transcription regulator, AsnC-type-like; SMART: Transcription regulator, AsnC-type.
       0.505
Tpau_1749
L-lysine 6-monooxygenase (NADPH); KEGG: cur:cur_0328 putative L-ornithine N5- oxygenase.
       0.428
Tpau_1750
KEGG: mab:MAB_1936 hypothetical protein.
       0.428
Tpau_1751
PFAM: MMPL domain protein; KEGG: mjl:Mjls_4293 MmpL domain-containing protein.
       0.428
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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