Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Tpau_1748KEGG: kra:Krad_4427 hypothetical protein. (911 aa)    
Predicted Functional Partners:
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
  
 
 0.916
Tpau_3064
TIGRFAM: alpha-glucan phosphorylase; KEGG: ami:Amir_6071 alpha-glucan phosphorylase; PFAM: glycosyl transferase family 35.
  
 
 0.805
Tpau_1747
PFAM: Pirin domain protein; KEGG: rer:RER_49560 hypothetical protein; Belongs to the pirin family.
       0.603
Tpau_1745
PFAM: permease for cytosine/purines uracil thiamine allantoin; KEGG: aau:AAur_3952 putative cytosine/purine/uracil/thiamine/allantoin permease family protein; Belongs to the purine-cytosine permease (2.A.39) family.
       0.600
Tpau_1746
PFAM: Amidohydrolase 3; amidohydrolase; KEGG: rer:RER_47290 hypothetical protein.
       0.595
Tpau_1749
L-lysine 6-monooxygenase (NADPH); KEGG: cur:cur_0328 putative L-ornithine N5- oxygenase.
       0.535
Tpau_1750
KEGG: mab:MAB_1936 hypothetical protein.
       0.535
Tpau_1751
PFAM: MMPL domain protein; KEGG: mjl:Mjls_4293 MmpL domain-containing protein.
       0.535
Tpau_1752
KEGG: cai:Caci_2076 AAA ATPase central domain protein; PFAM: AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; Belongs to the AAA ATPase family.
       0.480
Tpau_1753
KEGG: msm:MSMEG_1855 TPR repeat-containing protein; PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide repeat.
       0.480
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.