Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tpau_1771PFAM: cell divisionFtsK/SpoIIIE; DNA translocase ftsK gamma; KEGG: rha:RHA1_ro06750 DNA translocase FtsK. (894 aa)    
Predicted Functional Partners:
Tpau_4236
TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: msm:MSMEG_6938 ParB-like partition proteins; SMART: ParB domain protein nuclease; Belongs to the ParB family.
  
  
 0.871
Tpau_2652
KEGG: rha:RHA1_ro01094 peptidoglycan glycosyltransferase; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain.
 
 
 
 0.765
Tpau_2647
KEGG: rer:RER_35530 cell division protein FtsW; TIGRFAM: cell division protein FtsW; PFAM: cell cycle protein; Belongs to the SEDS family.
 
  
 0.762
xerC
Integrase family protein; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.
 
   
 0.761
Tpau_2644
Polypeptide-transport-associated domain protein FtsQ-type; Essential cell division protein.
 
 
 0.761
xerD
Tyrosine recombinase XerD; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.
 
   
 0.754
Tpau_0864
Secretion protein snm4; KEGG: nfa:nfa8270 hypothetical protein; TIGRFAM: secretion protein snm4; PFAM: protein of unknown function DUF571.
    
 
 0.750
Tpau_4168
KEGG: nfa:nfa55730 single-stranded DNA-binding protein; TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n.
 
  
 0.738
Tpau_4237
PFAM: Cobyrinic acid ac-diamide synthase; KEGG: rha:RHA1_ro03655 chromosome partitioning protein ParA.
  
  
 0.719
Tpau_1770
KEGG: msm:MSMEG_0703 hypothetical protein.
       0.687
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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