Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tpau_1778Phage shock protein A, PspA; PFAM: PspA/IM30 family protein; KEGG: mab:MAB_3067c hypothetical protein. (272 aa)    
Predicted Functional Partners:
Tpau_1395
KEGG: rer:RER_38230 hypothetical protein.
 
  
 0.835
Tpau_1779
KEGG: rer:RER_27430 hypothetical protein.
  
  
 0.805
Tpau_0913
Phage shock protein C, PspC; PFAM: PspC domain protein; KEGG: nfa:nfa9000 hypothetical protein.
  
 
 0.803
Tpau_2312
Phage shock protein C, PspC; PFAM: PspC domain protein; KEGG: rer:RER_48860 hypothetical protein.
  
 
 0.803
Tpau_0914
Putative signal transduction histidine kinase; PFAM: PspC domain protein; ATP-binding region ATPase domain protein; KEGG: rop:ROP_62650 putative two-component histidine kinase.
  
 
 0.794
Tpau_2673
Conserved hypothetical protein; Exonuclease that cleaves single-stranded 3' overhangs of double-stranded RNA.
  
     0.773
Tpau_3331
Chorismate mutase; KEGG: nfa:nfa49960 hypothetical protein; TIGRFAM: chorismate mutase; PFAM: Chorismate mutase.
  
     0.772
Tpau_0977
KEGG: rha:RHA1_ro06252 hypothetical protein.
  
     0.754
Tpau_1836
KEGG: rop:ROP_68000 hypothetical membrane protein.
  
     0.752
Tpau_1470
KEGG: rer:RER_37980 hypothetical protein.
  
     0.749
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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