Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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textmining
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
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[Homology]
Score
Tpau_1856KEGG: rha:RHA1_ro02725 hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase. (224 aa)    
Predicted Functional Partners:
Tpau_1860
PFAM: acyl-CoA dehydrogenase domain protein; Acyl- CoA dehydrogenase type 2 domain; KEGG: nfa:nfa34080 putative acyl-CoA dehydrogenase.
 
 
  0.844
Tpau_1861
PFAM: acyl-CoA dehydrogenase domain protein; KEGG: svi:Svir_16750 acyl-CoA dehydrogenase.
   
  0.819
Tpau_1862
PFAM: acyl-CoA dehydrogenase domain protein; Acyl- CoA dehydrogenase type 2 domain; KEGG: rop:ROP_12060 putative acyl-CoA dehydrogenase.
   
  0.819
Tpau_1857
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rha:RHA1_ro02340 3-oxoacyl-[acyl-carrier- protein] reductase.
  
 
  0.817
Tpau_1858
Enoyl-CoA hydratase; KEGG: sma:SAV_6603 hypothetical protein; PFAM: MaoC domain protein dehydratase.
  
 
 0.811
Tpau_1859
PFAM: aminoglycoside phosphotransferase; KEGG: rha:RHA1_ro02722 phosphotransferase.
 
     0.806
Tpau_1855
PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rha:RHA1_ro01498 quinone oxidoreductase.
  
    0.785
Tpau_1863
Aryldialkylphosphatase; KEGG: rha:RHA1_ro01514 phosphotriesterase; PFAM: aryldialkylphosphatase.
 
     0.707
Tpau_1864
PFAM: AMP-dependent synthetase and ligase; KEGG: cai:Caci_4379 AMP-dependent synthetase and ligase.
  
    0.666
Tpau_1321
PFAM: acyl-CoA dehydrogenase domain protein; Acyl- CoA dehydrogenase type 2 domain; KEGG: rha:RHA1_ro02754 long-chain-acyl-CoA dehydrogenase.
  
 
  0.417
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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