Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
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[Homology]
Score
Tpau_1860PFAM: acyl-CoA dehydrogenase domain protein; Acyl- CoA dehydrogenase type 2 domain; KEGG: nfa:nfa34080 putative acyl-CoA dehydrogenase. (407 aa)    
Predicted Functional Partners:
Tpau_1859
PFAM: aminoglycoside phosphotransferase; KEGG: rha:RHA1_ro02722 phosphotransferase.
 
 0.995
Tpau_0342
PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; KEGG: mab:MAB_0851 fatty oxidation protein FadB.
  
 0.969
Tpau_4183
PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; KEGG: mab:MAB_0851 fatty oxidation protein FadB.
  
 0.969
Tpau_0775
TIGRFAM: acetyl-CoA acetyltransferase; KEGG: rer:RER_56240 acetyl-CoA acyltransferase; PFAM: Thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.948
Tpau_3822
TIGRFAM: acetyl-CoA acetyltransferase; KEGG: rop:ROP_47770 putative acetyl-CoA acyltransferase; PFAM: Thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.948
Tpau_3832
TIGRFAM: acetyl-CoA acetyltransferase; KEGG: swi:Swit_3630 acetyl-CoA acetyltransferase; PFAM: Thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.948
Tpau_2936
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: rer:RER_23640 enoyl-CoA hydratase.
   
 0.947
Tpau_3321
KEGG: rha:RHA1_ro06095 fatty acid CoA carboxylase B subunit; PFAM: carboxyl transferase.
  
 
 0.928
Tpau_4229
PFAM: Aldehyde Dehydrogenase; Proline dehydrogenase; KEGG: ckp:ckrop_0287 delta-1-pyrroline-5- carboxylate dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 
 0.927
Tpau_4117
PFAM: acyl-CoA dehydrogenase domain protein; Acyl- CoA dehydrogenase type 2 domain; KEGG: rer:pREC1_0069 acyl-CoA dehydrogenase.
  
  
 
0.920
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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