Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tpau_1865PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: rop:ROP_12170 putative MFS transporter. (463 aa)    
Predicted Functional Partners:
Tpau_1866
PFAM: regulatory protein TetR; KEGG: rop:ROP_23970 putative TetR family transcriptional regulator.
       0.623
Tpau_1864
PFAM: AMP-dependent synthetase and ligase; KEGG: cai:Caci_4379 AMP-dependent synthetase and ligase.
       0.446
Tpau_1863
Aryldialkylphosphatase; KEGG: rha:RHA1_ro01514 phosphotriesterase; PFAM: aryldialkylphosphatase.
       0.444
Tpau_1859
PFAM: aminoglycoside phosphotransferase; KEGG: rha:RHA1_ro02722 phosphotransferase.
  
    0.408
Tpau_1858
Enoyl-CoA hydratase; KEGG: sma:SAV_6603 hypothetical protein; PFAM: MaoC domain protein dehydratase.
       0.406
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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