Tpau_1868 protein (Tsukamurella paurometabola)

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Tpau_1868

PFAM: plasmid pRiA4b ORF-3 family protein; KEGG: nca:Noca_0009 plasmid pRiA4b ORF-3 family protein. (482 aa)

Predicted Functional Partners:

secY

0.571

polA

0.548

secE

0.547

Tpau_2537

0.524

rplY

0.483

Tpau_4018

0.403

Your Current Organism:

Tsukamurella paurometabola

NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Tpau_1868	Tpau_2537	Tpau_1868	Tpau_2537	PFAM: plasmid pRiA4b ORF-3 family protein; KEGG: nca:Noca_0009 plasmid pRiA4b ORF-3 family protein.	Preprotein translocase, SecG subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.	0.524
Tpau_1868	Tpau_4018	Tpau_1868	Tpau_4018	PFAM: plasmid pRiA4b ORF-3 family protein; KEGG: nca:Noca_0009 plasmid pRiA4b ORF-3 family protein.	PFAM: Alkaline phosphatase; KEGG: rer:RER_19780 alkaline phosphatase; SMART: Alkaline phosphatase; Belongs to the alkaline phosphatase family.	0.403
Tpau_1868	polA	Tpau_1868	Tpau_2445	PFAM: plasmid pRiA4b ORF-3 family protein; KEGG: nca:Noca_0009 plasmid pRiA4b ORF-3 family protein.	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.	0.548
Tpau_1868	rplY	Tpau_1868	Tpau_3209	PFAM: plasmid pRiA4b ORF-3 family protein; KEGG: nca:Noca_0009 plasmid pRiA4b ORF-3 family protein.	Ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily.	0.483
Tpau_1868	secE	Tpau_1868	Tpau_0740	PFAM: plasmid pRiA4b ORF-3 family protein; KEGG: nca:Noca_0009 plasmid pRiA4b ORF-3 family protein.	Preprotein translocase, SecE subunit; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.	0.547
Tpau_1868	secY	Tpau_1868	Tpau_3397	PFAM: plasmid pRiA4b ORF-3 family protein; KEGG: nca:Noca_0009 plasmid pRiA4b ORF-3 family protein.	Preprotein translocase, SecY subunit; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently.	0.571
Tpau_2537	Tpau_1868	Tpau_2537	Tpau_1868	Preprotein translocase, SecG subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.	PFAM: plasmid pRiA4b ORF-3 family protein; KEGG: nca:Noca_0009 plasmid pRiA4b ORF-3 family protein.	0.524
Tpau_2537	polA	Tpau_2537	Tpau_2445	Preprotein translocase, SecG subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.	0.470
Tpau_2537	rplY	Tpau_2537	Tpau_3209	Preprotein translocase, SecG subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.	Ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily.	0.842
Tpau_2537	secE	Tpau_2537	Tpau_0740	Preprotein translocase, SecG subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.	Preprotein translocase, SecE subunit; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.	0.997
Tpau_2537	secY	Tpau_2537	Tpau_3397	Preprotein translocase, SecG subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.	Preprotein translocase, SecY subunit; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently.	0.994
Tpau_4018	Tpau_1868	Tpau_4018	Tpau_1868	PFAM: Alkaline phosphatase; KEGG: rer:RER_19780 alkaline phosphatase; SMART: Alkaline phosphatase; Belongs to the alkaline phosphatase family.	PFAM: plasmid pRiA4b ORF-3 family protein; KEGG: nca:Noca_0009 plasmid pRiA4b ORF-3 family protein.	0.403
polA	Tpau_1868	Tpau_2445	Tpau_1868	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.	PFAM: plasmid pRiA4b ORF-3 family protein; KEGG: nca:Noca_0009 plasmid pRiA4b ORF-3 family protein.	0.548
polA	Tpau_2537	Tpau_2445	Tpau_2537	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.	Preprotein translocase, SecG subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.	0.470
polA	secY	Tpau_2445	Tpau_3397	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.	Preprotein translocase, SecY subunit; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently.	0.515
rplY	Tpau_1868	Tpau_3209	Tpau_1868	Ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily.	PFAM: plasmid pRiA4b ORF-3 family protein; KEGG: nca:Noca_0009 plasmid pRiA4b ORF-3 family protein.	0.483
rplY	Tpau_2537	Tpau_3209	Tpau_2537	Ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily.	Preprotein translocase, SecG subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.	0.842
rplY	secE	Tpau_3209	Tpau_0740	Ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily.	Preprotein translocase, SecE subunit; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.	0.737
rplY	secY	Tpau_3209	Tpau_3397	Ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily.	Preprotein translocase, SecY subunit; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently.	0.819
secE	Tpau_1868	Tpau_0740	Tpau_1868	Preprotein translocase, SecE subunit; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.	PFAM: plasmid pRiA4b ORF-3 family protein; KEGG: nca:Noca_0009 plasmid pRiA4b ORF-3 family protein.	0.547

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