STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tpau_1883KEGG: mmi:MMAR_2016 hypothetical protein. (157 aa)    
Predicted Functional Partners:
dut
Deoxyuridine 5'-triphosphate nucleotidohydrolase Dut; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family.
       0.705
Tpau_1885
KEGG: nfa:nfa37520 hypothetical protein.
 
     0.687
Tpau_2714
KEGG: mjl:Mjls_3359 putative transmembrane protein.
  
     0.587
Tpau_2694
Rieske (2Fe-2S) iron-sulfur domain protein; PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: mab:MAB_1967c ubiquinol-cytochrome c reductase iron-sulfur subunit (Rieske iron-sulfur protein).
  
     0.585
Tpau_1538
Cytochrome-c oxidase; Part of cytochrome c oxidase, its function is unknown. Belongs to the cytochrome c oxidase bacterial subunit CtaF family.
  
     0.565
Tpau_2074
PFAM: regulatory protein TetR; KEGG: nfa:nfa34840 putative transcriptional regulator.
  
     0.558
Tpau_1470
KEGG: rer:RER_37980 hypothetical protein.
  
     0.542
Tpau_0137
PFAM: Abortive infection protein; KEGG: mgi:Mflv_2806 abortive infection protein.
  
     0.495
Tpau_1757
KEGG: msm:MSMEG_2665 hypothetical protein.
  
     0.488
Tpau_2693
PFAM: cytochrome c class I; KEGG: rop:ROP_08590 menaquinol-cytochrome c reductase cytochrome c subunit.
  
     0.484
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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