Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tpau_1897PFAM: TAP domain protein; alpha/beta hydrolase fold; KEGG: mab:MAB_2977 hypothetical protein. (520 aa)    
Predicted Functional Partners:
Tpau_1896
PFAM: Protein of unknown function DUF2029; KEGG: rer:RER_28550 arabinosyltransferase AftC.
 
     0.855
Tpau_1898
PFAM: bifunctional deaminase-reductase domain protein; KEGG: mab:MAB_2976 hypothetical protein.
       0.753
Tpau_1895
TIGRFAM: methionine-R-sulfoxide reductase; KEGG: car:cauri_1440 peptide methionine sulfoxide reductase; PFAM: Methionine sulfoxide reductase B.
       0.730
Tpau_2927
KEGG: rha:RHA1_ro06456 hypothetical protein.
  
     0.703
Tpau_2076
KEGG: rop:ROP_69960 hypothetical membrane protein.
  
     0.695
Tpau_3546
KEGG: rop:ROP_49410 hypothetical protein.
  
     0.686
Tpau_0334
KEGG: mgi:Mflv_5453 hypothetical protein.
  
     0.667
Tpau_1899
PFAM: AFG1-family ATPase; KEGG: rha:RHA1_ro06866 AFG1-like ATPase.
       0.627
Tpau_3062
PFAM: protein of unknown function UPF0089; KEGG: mab:MAB_1278 hypothetical protein.
  
     0.627
Tpau_0516
KEGG: nfa:nfa53740 hypothetical protein.
  
     0.621
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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