Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tpau_1900PFAM: protein of unknown function DUF156; KEGG: nfa:nfa8420 hypothetical protein. (109 aa)    
Predicted Functional Partners:
Tpau_1901
Heavy metal translocating P-type ATPase; KEGG: nfa:nfa1600 putative cation transporter; TIGRFAM: heavy metal translocating P-type ATPase; copper-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase.
 
  
 0.862
Tpau_1902
Hypothetical protein.
       0.778
Tpau_0674
PFAM: Heavy metal transport/detoxification protein; KEGG: svi:Svir_36750 copper chaperone.
 
  
 0.578
Tpau_1904
Hypothetical protein.
       0.498
Tpau_1905
PFAM: protein of unknown function DUF1470; KEGG: ami:Amir_3432 protein of unknown function DUF1470.
       0.498
Tpau_1903
KEGG: rha:RHA1_ro02077 hypothetical protein.
       0.494
Tpau_0355
KEGG: mgi:Mflv_2852 copper-translocating P-type ATPase; TIGRFAM: copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Haloacid dehalogenase domain protein hydrolase.
 
  
 0.424
Tpau_0408
KEGG: rha:RHA1_ro02587 mycothiol-dependent formaldehyde dehydrogenase; TIGRFAM: mycothiol-dependent formaldehyde dehydrogenase; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein.
  
  
 0.412
Tpau_2391
PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: msm:MSMEG_2034 aryl-alcohol dehydrogenase.
  
  
 0.412
Tpau_2883
PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rha:RHA1_ro05321 alcohol dehydrogenase.
  
  
 0.412
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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