Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tpau_1924PFAM: NUDIX hydrolase; KEGG: rop:ROP_68620 hypothetical protein. (340 aa)    
Predicted Functional Partners:
Tpau_1923
PFAM: glycosyl transferase group 1; KEGG: rer:RER_29070 mannosyltransferase PimA.
 
  
 0.967
Tpau_1922
PFAM: lipid A biosynthesis acyltransferase; KEGG: rer:RER_29060 acyltransferase.
 
   
 0.925
Tpau_1920
PFAM: histidine triad (HIT) protein; KEGG: rop:ROP_68580 HIT family protein.
  
 
 0.889
Tpau_1921
PFAM: CDP-alcohol phosphatidyltransferase; KEGG: rer:RER_29050 phosphatidylinositol synthase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
 
  
 0.863
thrS
KEGG: rer:RER_29030 threonyl-tRNA synthetase; TIGRFAM: threonyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Anticodon-binding domain protein; Threonyl/alanyl tRNA synthetase SAD; Belongs to the class-II aminoacyl-tRNA synthetase family.
   
 
 0.752
Tpau_3144
KEGG: nfa:nfa48230 hypothetical protein.
  
     0.677
nnrD
Carbohydrate kinase, YjeF related protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. In the C-terminal section; belongs to the NnrD/CARKD family.
  
 0.657
Tpau_1127
KEGG: mab:MAB_3524c hypothetical protein.
 
     0.592
Tpau_0730
KEGG: rer:RER_17050 hypothetical protein.
  
     0.587
Tpau_4051
PFAM: protein of unknown function DUF1089; KEGG: rop:ROP_40830 hypothetical protein.
  
     0.579
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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