Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tpau_1927PFAM: RDD domain containing protein; KEGG: bcv:Bcav_3212 FHA domain containing protein. (431 aa)    
Predicted Functional Partners:
Tpau_1928
PFAM: Protein phosphatase 2C-like; KEGG: bfa:Bfae_21560 serine/threonine protein phosphatase; SMART: protein phosphatase 2C domain protein.
  
  
 0.782
Tpau_3922
Hypothetical protein; KEGG: spn:SP_1772 cell wall surface anchor family protein.
 
     0.758
Tpau_2062
Hypothetical protein; KEGG: similar to CG16995 CG16995-PA.
  
     0.755
Tpau_0881
Hypothetical protein; KEGG: spn:SP_1772 cell wall surface anchor family protein.
  
     0.752
Tpau_0078
Hypothetical protein; KEGG: xop:PXO_03299 endoglucanase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
     0.726
Tpau_0312
Hypothetical protein; KEGG: bch:Bcen2424_6766 PE-PGRS family protein.
  
     0.719
Tpau_0518
Hypothetical protein; KEGG: bch:Bcen2424_6766 PE-PGRS family protein.
  
     0.719
Tpau_1929
Choloyl-CoA hydrolase; KEGG: rop:ROP_68660 acyl-CoA thioesterase; PFAM: acyl-CoA thioesterase.
       0.718
Tpau_3539
PFAM: Forkhead-associated protein; KEGG: nfa:nfa8620 hypothetical protein.
 
   
 0.712
Tpau_0332
Secretion protein snm4; KEGG: msm:MSMEG_0068 transmembrane protein; TIGRFAM: secretion protein snm4; PFAM: protein of unknown function DUF571.
  
     0.711
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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