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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
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[Homology]
Score
Tpau_1970PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mgi:Mflv_0118 binding-protein-dependent transport systems inner membrane component. (339 aa)    
Predicted Functional Partners:
Tpau_1969
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mgi:Mflv_0117 binding-protein-dependent transport systems inner membrane component.
 
 0.998
Tpau_1971
PFAM: extracellular solute-binding protein family 5; KEGG: mgi:Mflv_0119 extracellular solute-binding protein.
 
 0.998
Tpau_1968
KEGG: mgi:Mflv_0116 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase.
 
 0.997
Tpau_3604
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rha:RHA1_ro03311 ABC peptide transporter, permease component.
 
 0.994
Tpau_3603
KEGG: rha:RHA1_ro03312 ABC peptide transporter, ATP- binding component; PFAM: ABC transporter related; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
 
 0.993
Tpau_3602
PFAM: extracellular solute-binding protein family 5; KEGG: rha:RHA1_ro03309 ABC peptide transporter, substrate-binding component.
 
 0.991
Tpau_3915
PFAM: extracellular solute-binding protein family 5; KEGG: rop:ROP_42430 putative ABC transporter substrate-binding protein.
 
 
 0.960
Tpau_3913
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: car:cauri_0213 iron ABC transport system, permease protein.
 
 0.947
Tpau_3912
KEGG: rer:RER_05000 ABC transporter ATP-binding protein; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
 
 
 0.938
Tpau_3605
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rha:RHA1_ro03310 ABC peptide transporter, permease component.
  
  
 
0.927
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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