Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tpau_2013PFAM: DoxX family protein; KEGG: mab:MAB_1882c hypothetical protein. (157 aa)    
Predicted Functional Partners:
Tpau_1034
Rhodanese domain protein; KEGG: mab:MAB_3641 putative thiosulfate sulfurtransferase; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein.
   
 
  0.902
Tpau_3051
Rhodanese domain protein; KEGG: krh:KRH_21880 3-mercaptopyruvate sulfurtransferase; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein.
   
 
  0.902
Tpau_3547
Thiosulfate sulfurtransferase; PFAM: Rhodanese domain protein; KEGG: mav:MAV_0756 putative thiosulfate sulfurtransferase; SMART: Rhodanese domain protein.
   
 
  0.902
Tpau_2014
PFAM: Electron transfer DM13; KEGG: mab:MAB_1883c hypothetical protein.
       0.813
Tpau_2016
Integral membrane sensor signal transduction histidine kinase; KEGG: sco:SCO3740 histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein.
       0.565
Tpau_2015
Two component transcriptional regulator, winged helix family; KEGG: cmi:CMM_2335 putative two-component system response regulator; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver.
       0.523
Tpau_1222
KEGG: nfa:nfa17840 putative transporter ATPase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Haloacid dehalogenase domain protein hydrolase.
   
  0.464
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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