Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tpau_2030Allantoin catabolism protein; KEGG: mgi:Mflv_3172 hypothetical protein; TIGRFAM: allantoin catabolism protein; PFAM: Cupin 2 conserved barrel domain protein; protein of unknown function DUF861 cupin_3. (271 aa)    
Predicted Functional Partners:
Tpau_2031
KEGG: mgi:Mflv_3173 hypothetical protein; Belongs to the HpcH/HpaI aldolase family.
 
     0.937
Tpau_2032
Transcriptional regulator, IclR family; KEGG: mgi:Mflv_3174 regulatory protein, IclR; PFAM: regulatory protein IclR; Transcriptional regulator IclR; SMART: regulatory protein IclR.
 
     0.659
Tpau_2026
Allantoinase; KEGG: mgi:Mflv_3169 allantoinase; TIGRFAM: allantoinase; PFAM: amidohydrolase; Amidohydrolase 3.
 
  
 0.645
Tpau_2028
PFAM: Asp/Glu/hydantoin racemase; KEGG: mgi:Mflv_3171 Asp/Glu racemase.
 
     0.625
Tpau_2027
PFAM: permease for cytosine/purines uracil thiamine allantoin; KEGG: mgi:Mflv_3170 permease for cytosine/purines, uracil, thiamine, allantoin.
 
     0.602
Tpau_2965
KEGG: msm:MSMEG_1293 xanthine/uracil permeases family protein; TIGRFAM: xanthine permease; uracil-xanthine permease; PFAM: Xanthine/uracil/vitamin C permease; Oxo-4- hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase.
 
   
 0.527
Tpau_2961
Hydroxyisourate hydrolase; KEGG: mmi:MMAR_4947 hypothetical protein; TIGRFAM: hydroxyisourate hydrolase; PFAM: Transthyretin; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily.
 
   
 0.461
Tpau_0843
PFAM: permease for cytosine/purines uracil thiamine allantoin; KEGG: mab:MAB_2815c NCS1 nucleoside transporter family protein.
 
     0.438
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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