Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
Tpau_2031KEGG: mgi:Mflv_3173 hypothetical protein; Belongs to the HpcH/HpaI aldolase family. (427 aa)    
Predicted Functional Partners:
Tpau_2030
Allantoin catabolism protein; KEGG: mgi:Mflv_3172 hypothetical protein; TIGRFAM: allantoin catabolism protein; PFAM: Cupin 2 conserved barrel domain protein; protein of unknown function DUF861 cupin_3.
 
     0.937
Tpau_2026
Allantoinase; KEGG: mgi:Mflv_3169 allantoinase; TIGRFAM: allantoinase; PFAM: amidohydrolase; Amidohydrolase 3.
 
    0.826
Tpau_2960
OHCU decarboxylase; KEGG: krh:KRH_19760 hypothetical protein; TIGRFAM: OHCU decarboxylase; PFAM: Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase.
 
     0.776
Tpau_2961
Hydroxyisourate hydrolase; KEGG: mmi:MMAR_4947 hypothetical protein; TIGRFAM: hydroxyisourate hydrolase; PFAM: Transthyretin; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily.
 
     0.741
Tpau_2032
Transcriptional regulator, IclR family; KEGG: mgi:Mflv_3174 regulatory protein, IclR; PFAM: regulatory protein IclR; Transcriptional regulator IclR; SMART: regulatory protein IclR.
 
     0.670
Tpau_2027
PFAM: permease for cytosine/purines uracil thiamine allantoin; KEGG: mgi:Mflv_3170 permease for cytosine/purines, uracil, thiamine, allantoin.
 
     0.594
Tpau_2028
PFAM: Asp/Glu/hydantoin racemase; KEGG: mgi:Mflv_3171 Asp/Glu racemase.
 
     0.556
Tpau_0843
PFAM: permease for cytosine/purines uracil thiamine allantoin; KEGG: mab:MAB_2815c NCS1 nucleoside transporter family protein.
 
     0.483
Tpau_0186
KEGG: mkm:Mkms_0089 PTS system, fructose subfamily, IIC subunit; TIGRFAM: PTS system, fructose subfamily, IIC subunit; PTS system, fructose subfamily, IIA subunit; PTS system, fructose-specific, IIB subunnit; PFAM: phosphotransferase system PTS fructose- specific IIB subunit; phosphotransferase system EIIC; phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2.
   
  
 0.400
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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