Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tpau_2069PFAM: protein of unknown function DUF218; KEGG: rha:RHA1_ro05676 hypothetical protein. (253 aa)    
Predicted Functional Partners:
Tpau_3374
KEGG: nfa:nfa8180 hypothetical protein.
  
     0.669
Tpau_3387
KEGG: cgt:cgR_0900 hypothetical protein.
  
     0.604
Tpau_2068
KEGG: mgi:Mflv_1048 hypothetical protein.
       0.541
Tpau_0334
KEGG: mgi:Mflv_5453 hypothetical protein.
  
     0.531
Tpau_0370
KEGG: rop:ROP_52280 hypothetical membrane protein.
  
     0.514
Tpau_1315
PFAM: MaoC domain protein dehydratase; Beta- ketoacyl synthase; Acyl transferase; domain of unknown function DUF1729; KEGG: nfa:nfa12570 putative fatty acid synthase.
  
  
 0.504
Tpau_3796
PFAM: Mammalian cell entry related domain protein; KEGG: rop:ROP_18060 putative Mce family protein.
  
     0.503
Tpau_2367
PFAM: Mammalian cell entry related domain protein; KEGG: nfa:nfa11150 putative Mce family protein.
  
     0.502
Tpau_2070
PFAM: extracellular solute-binding protein family 1; KEGG: mva:Mvan_3093 extracellular solute-binding protein.
       0.488
Tpau_2071
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mva:Mvan_3092 binding-protein-dependent transport systems inner membrane component.
       0.488
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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