Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tpau_2070PFAM: extracellular solute-binding protein family 1; KEGG: mva:Mvan_3093 extracellular solute-binding protein. (345 aa)    
Predicted Functional Partners:
Tpau_2071
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mva:Mvan_3092 binding-protein-dependent transport systems inner membrane component.
 
 
 0.995
Tpau_2072
KEGG: rxy:Rxyl_1173 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
 
 
 0.985
Tpau_2073
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mgi:Mflv_4018 glyoxalase/bleomycin resistance protein/dioxygenase.
  
    0.716
Tpau_3348
PFAM: iron permease FTR1; Peptidase M75, Imelysin; KEGG: mab:MAB_1159 putative iron permease FTR1.
   
  
 0.685
Tpau_2069
PFAM: protein of unknown function DUF218; KEGG: rha:RHA1_ro05676 hypothetical protein.
       0.488
Tpau_2097
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sgr:SGR_4695 putative ABC transporter permease protein.
  
  
 0.461
Tpau_3055
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bcv:Bcav_3808 binding-protein-dependent transport systems inner membrane component.
  
  
 0.447
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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