Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tpau_2080Von Willebrand factor type A; KEGG: rer:RER_30730 hypothetical protein; PFAM: von Willebrand factor type A; SMART: von Willebrand factor type A. (327 aa)    
Predicted Functional Partners:
Tpau_2079
KEGG: nfa:nfa34790 hypothetical protein.
 
  
 0.986
Tpau_2078
PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; KEGG: nfa:nfa34800 putative regulator.
 
  
 0.964
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
     
 0.653
Tpau_2077
PFAM: NLP/P60 protein; KEGG: rer:RER_30700 Rpf-interacting protein.
     
 0.645
Tpau_2082
Enoyl-(acyl-carrier-protein) reductase (NADH); KEGG: nfa:nfa34760 enoyl-(acyl carrier protein) reductase.
       0.633
Tpau_2081
KEGG: rop:ROP_70010 3-oxoacyl-[acyl-carrier- protein] reductase; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase.
       0.618
Tpau_1700
Sigma 54 interacting domain protein; KEGG: nfa:nfa40830 putative magnesium chelatase subunit; PFAM: ATPase associated with various cellular activities AAA_5; magnesium chelatase ChlI subunit; von Willebrand factor type A; SMART: von Willebrand factor type A; AAA ATPase.
  
 
 0.541
Tpau_3299
KEGG: rha:RHA1_ro05589 magnesium chelatase subunit ChlI.
  
 
 0.541
Tpau_2899
PFAM: amino acid-binding ACT domain protein; KEGG: nfa:nfa42600 hypothetical protein.
 
     0.535
Tpau_4193
KEGG: rha:RHA1_ro03442 hypothetical protein.
  
     0.493
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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