Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Tpau_2095Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bcv:Bcav_0524 transcriptional regulator, LysR family. (309 aa)    
Predicted Functional Partners:
Tpau_2094
PFAM: C4-dicarboxylate transporter/malic acid transport protein; KEGG: art:Arth_4391 C4-dicarboxylate transporter/malic acid transport protein.
 
     0.739
Tpau_4029
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: sco:SCO4897 transcriptional regulator.
  
     0.727
Tpau_0641
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: nfa:nfa14310 putative transcriptional regulator.
  
     0.700
Tpau_0136
KEGG: nfa:nfa1290 putative transcriptional regulator; TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator.
   
    0.697
Tpau_3197
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: mab:MAB_0998 LysR family transcriptional regulator.
  
   
0.682
Tpau_1622
KEGG: rha:RHA1_ro00074 response regulator, two- component system; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver.
  
    0.679
Tpau_3248
Two component transcriptional regulator, winged helix family; KEGG: sma:SAV_2395 two-component system response regulator for high-affinity potassium transport system; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver.
   
    0.640
Tpau_3067
KEGG: mjl:Mjls_1079 MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR.
   
    0.629
Tpau_2134
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: nfa:nfa26710 putative transcriptional regulator.
  
     0.604
Tpau_1275
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: mab:MAB_2680c LysR family transcriptional regulator.
  
     0.594
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
Server load: medium (58%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.