Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tpau_2096PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mab:MAB_1504 ABC transporter permease. (264 aa)    
Predicted Functional Partners:
Tpau_2098
KEGG: rer:RER_25610 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase.
 
 0.995
Tpau_2099
PFAM: extracellular solute-binding protein family 1; KEGG: rop:ROP_66360 putative ABC transporter substrate-binding protein.
 
  
 0.991
Tpau_2097
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sgr:SGR_4695 putative ABC transporter permease protein.
 
  
 
0.972
Tpau_3054
KEGG: ami:Amir_0748 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
 
 
 0.854
Tpau_2072
KEGG: rxy:Rxyl_1173 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
 
 
 0.818
Tpau_2304
KEGG: rop:ROP_34560 putative molybdate ABC transporter ATP-binding protein; PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase.
 
 
 0.811
Tpau_2100
KEGG: aau:AAur_1206 FAD dependent oxidoreductase domain-containing protein; TIGRFAM: FAD dependent oxidoreductase TIGR03364; PFAM: FAD dependent oxidoreductase.
       0.649
Tpau_2102
PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: aau:AAur_1208 putative phosphonoacetaldehyde hydrolase.
       0.505
Tpau_2101
KEGG: aau:AAur_1207 GntR family transcriptional regulator; PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH.
     
 0.441
Tpau_2895
PFAM: FAD dependent oxidoreductase; KEGG: rha:RHA1_ro05325 oxidoreductase.
 
     0.425
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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