Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Tpau_2097PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sgr:SGR_4695 putative ABC transporter permease protein. (289 aa)    
Predicted Functional Partners:
Tpau_2099
PFAM: extracellular solute-binding protein family 1; KEGG: rop:ROP_66360 putative ABC transporter substrate-binding protein.
 
 
 0.996
Tpau_2098
KEGG: rer:RER_25610 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase.
 
 0.985
Tpau_2096
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mab:MAB_1504 ABC transporter permease.
 
  
 
0.972
Tpau_2100
KEGG: aau:AAur_1206 FAD dependent oxidoreductase domain-containing protein; TIGRFAM: FAD dependent oxidoreductase TIGR03364; PFAM: FAD dependent oxidoreductase.
  
    0.660
Tpau_3054
KEGG: ami:Amir_0748 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
 
 
 0.651
Tpau_2778
KEGG: rer:RER_37540 sulfate ABC transporter permease protein; TIGRFAM: sulfate ABC transporter, inner membrane subunit CysW; sulfate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component.
  
    0.642
Tpau_3056
KEGG: sen:SACE_0981 ABC transporter substrate- binding protein; TIGRFAM: ABC transporter, periplasmic binding protein, thiB subfamily; PFAM: extracellular solute-binding protein family 1.
 
  
 0.568
Tpau_2102
PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: aau:AAur_1208 putative phosphonoacetaldehyde hydrolase.
 
     0.563
Tpau_2072
KEGG: rxy:Rxyl_1173 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
 
 
 0.553
Tpau_2304
KEGG: rop:ROP_34560 putative molybdate ABC transporter ATP-binding protein; PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase.
 
 
 0.546
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.