Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tpau_2113PFAM: oxidoreductase domain protein; Semialdehyde dehydrogenase NAD - binding; Oxidoreductase domain; KEGG: sen:SACE_0323 hypothetical protein. (294 aa)    
Predicted Functional Partners:
Tpau_2112
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; PAS fold-3 domain protein; GGDEF domain containing protein; PAS fold domain protein; PAS fold-4 domain protein; KEGG: rca:Rcas_3136 response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); SMART: EAL domain protein; GGDEF domain containing protein; PAC repeat-containing protein; PAS domain containing protein.
       0.778
Tpau_2114
PFAM: amino acid permease-associated region; KEGG: sen:SACE_3862 amino acid permease-associated region.
       0.778
Tpau_2115
Monooxygenase; KEGG: rha:RHA1_ro02881 monooxygenase.
 
     0.652
Tpau_4007
KEGG: sen:SACE_0256 hypothetical protein.
 
  
 0.617
Tpau_0024
KEGG: sen:SACE_0036 hypothetical protein.
  
     0.563
Tpau_2111
KEGG: rop:ROP_06880 hypothetical protein.
       0.557
Tpau_2116
PFAM: acyl-CoA dehydrogenase domain protein; Acyl- CoA dehydrogenase type 2 domain; KEGG: nfa:nfa54360 putative acyl-CoA dehydrogenase.
       0.551
Tpau_1357
PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: sco:SCO6988 oxidoreductase.
  
     0.538
Tpau_3482
PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: stp:Strop_2218 oxidoreductase domain- containing protein.
  
     0.487
Tpau_0123
KEGG: svi:Svir_26770 hypothetical protein.
  
     0.441
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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