Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Tpau_2137 | Tpau_2138 | Tpau_2137 | Tpau_2138 | PFAM: Phosphoglycerate mutase; KEGG: mgi:Mflv_3044 phosphoglycerate mutase. | KEGG: rer:RER_32000 hypothetical protein. | 0.915 |
Tpau_2137 | Tpau_2139 | Tpau_2137 | Tpau_2139 | PFAM: Phosphoglycerate mutase; KEGG: mgi:Mflv_3044 phosphoglycerate mutase. | KEGG: nfa:nfa29330 hypothetical protein. | 0.930 |
Tpau_2137 | Tpau_2141 | Tpau_2137 | Tpau_2141 | PFAM: Phosphoglycerate mutase; KEGG: mgi:Mflv_3044 phosphoglycerate mutase. | Hypothetical protein. | 0.586 |
Tpau_2137 | mshC | Tpau_2137 | Tpau_2140 | PFAM: Phosphoglycerate mutase; KEGG: mgi:Mflv_3044 phosphoglycerate mutase. | cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha- D-glucopyranoside ligase; Catalyzes the ATP-dependent condensation of GlcN-Ins and L- cysteine to form L-Cys-GlcN-Ins; Belongs to the class-I aminoacyl-tRNA synthetase family. MshC subfamily. | 0.733 |
Tpau_2138 | Tpau_2137 | Tpau_2138 | Tpau_2137 | KEGG: rer:RER_32000 hypothetical protein. | PFAM: Phosphoglycerate mutase; KEGG: mgi:Mflv_3044 phosphoglycerate mutase. | 0.915 |
Tpau_2138 | Tpau_2139 | Tpau_2138 | Tpau_2139 | KEGG: rer:RER_32000 hypothetical protein. | KEGG: nfa:nfa29330 hypothetical protein. | 0.964 |
Tpau_2138 | Tpau_2141 | Tpau_2138 | Tpau_2141 | KEGG: rer:RER_32000 hypothetical protein. | Hypothetical protein. | 0.620 |
Tpau_2138 | mca | Tpau_2138 | Tpau_3145 | KEGG: rer:RER_32000 hypothetical protein. | Mycothiol conjugate amidase Mca; A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl-inositol) S- conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics; Belongs to the MshB deacetylase family. Mca subfamily. | 0.524 |
Tpau_2138 | mshB | Tpau_2138 | Tpau_1146 | KEGG: rer:RER_32000 hypothetical protein. | 1D-myo-inosityl-2-acetamido-2-deoxy-alpha-D-gluc opyranosidedeacetylase; Catalyzes the deacetylation of 1D-myo-inositol 2-acetamido-2- deoxy-alpha-D-glucopyranoside (GlcNAc-Ins) in the mycothiol biosynthesis pathway. | 0.617 |
Tpau_2138 | mshC | Tpau_2138 | Tpau_2140 | KEGG: rer:RER_32000 hypothetical protein. | cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha- D-glucopyranoside ligase; Catalyzes the ATP-dependent condensation of GlcN-Ins and L- cysteine to form L-Cys-GlcN-Ins; Belongs to the class-I aminoacyl-tRNA synthetase family. MshC subfamily. | 0.798 |
Tpau_2138 | mshD | Tpau_2138 | Tpau_3544 | KEGG: rer:RER_32000 hypothetical protein. | Mycothiol biosynthesis acetyltransferase; Catalyzes the transfer of acetyl from acetyl-CoA to desacetylmycothiol (Cys-GlcN-Ins) to form mycothiol. | 0.422 |
Tpau_2139 | Tpau_2137 | Tpau_2139 | Tpau_2137 | KEGG: nfa:nfa29330 hypothetical protein. | PFAM: Phosphoglycerate mutase; KEGG: mgi:Mflv_3044 phosphoglycerate mutase. | 0.930 |
Tpau_2139 | Tpau_2138 | Tpau_2139 | Tpau_2138 | KEGG: nfa:nfa29330 hypothetical protein. | KEGG: rer:RER_32000 hypothetical protein. | 0.964 |
Tpau_2139 | Tpau_2141 | Tpau_2139 | Tpau_2141 | KEGG: nfa:nfa29330 hypothetical protein. | Hypothetical protein. | 0.624 |
Tpau_2139 | mca | Tpau_2139 | Tpau_3145 | KEGG: nfa:nfa29330 hypothetical protein. | Mycothiol conjugate amidase Mca; A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl-inositol) S- conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics; Belongs to the MshB deacetylase family. Mca subfamily. | 0.528 |
Tpau_2139 | mshB | Tpau_2139 | Tpau_1146 | KEGG: nfa:nfa29330 hypothetical protein. | 1D-myo-inosityl-2-acetamido-2-deoxy-alpha-D-gluc opyranosidedeacetylase; Catalyzes the deacetylation of 1D-myo-inositol 2-acetamido-2- deoxy-alpha-D-glucopyranoside (GlcNAc-Ins) in the mycothiol biosynthesis pathway. | 0.647 |
Tpau_2139 | mshC | Tpau_2139 | Tpau_2140 | KEGG: nfa:nfa29330 hypothetical protein. | cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha- D-glucopyranoside ligase; Catalyzes the ATP-dependent condensation of GlcN-Ins and L- cysteine to form L-Cys-GlcN-Ins; Belongs to the class-I aminoacyl-tRNA synthetase family. MshC subfamily. | 0.802 |
Tpau_2139 | mshD | Tpau_2139 | Tpau_3544 | KEGG: nfa:nfa29330 hypothetical protein. | Mycothiol biosynthesis acetyltransferase; Catalyzes the transfer of acetyl from acetyl-CoA to desacetylmycothiol (Cys-GlcN-Ins) to form mycothiol. | 0.485 |
Tpau_2141 | Tpau_2137 | Tpau_2141 | Tpau_2137 | Hypothetical protein. | PFAM: Phosphoglycerate mutase; KEGG: mgi:Mflv_3044 phosphoglycerate mutase. | 0.586 |
Tpau_2141 | Tpau_2138 | Tpau_2141 | Tpau_2138 | Hypothetical protein. | KEGG: rer:RER_32000 hypothetical protein. | 0.620 |
page 1 of 3