Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tpau_2176PPOX class putative F420-dependent enzyme; KEGG: rer:RER_31620 hypothetical protein; TIGRFAM: PPOX class probable F420-dependent enzyme; PFAM: pyridoxamine 5'-phosphate oxidase-related FMN- binding. (132 aa)    
Predicted Functional Partners:
Tpau_2180
TIGRFAM: precorrin-6x reductase; KEGG: nfa:nfa31540 precorrin-6x reductase; PFAM: Precorrin-6x reductase CbiJ/CobK.
 
     0.724
Tpau_2178
TIGRFAM: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; precorrin-6Y C5,15- methyltransferase (decarboxylating), CbiT subunit; KEGG: msm:MSMEG_3878 precorrin-6Y C5,15- methyltransferase (decarboxylating); PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase.
       0.685
Tpau_2179
TIGRFAM: precorrin-4 C11-methyltransferase; KEGG: fra:Francci3_1523 precorrin-4 C11- methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; Belongs to the precorrin methyltransferase family.
       0.685
Tpau_2177
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rer:RER_31610 oxidoreductase.
  
    0.662
Tpau_0280
KEGG: mva:Mvan_5448 luciferase family protein; TIGRFAM: F420-dependent oxidoreductase, G6PDH family; PFAM: Luciferase-like, subgroup.
  
   
 0.525
Tpau_2456
KEGG: fal:FRAAL1295 hypothetical protein.
  
     0.513
Tpau_2181
KEGG: mab:MAB_1108c hypothetical protein.
       0.455
Tpau_1408
KEGG: nca:Noca_2964 HhH-GPD family protein; TIGRFAM: HhH-GPD family protein; PFAM: HhH-GPD family protein.
  
     0.439
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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