Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tpau_2182KEGG: sgr:SGR_5718 MerR family transcriptional regulator; PFAM: regulatory protein MerR; SMART: regulatory protein MerR. (123 aa)    
Predicted Functional Partners:
Tpau_3082
KEGG: sma:SAV_540 MerR family transcriptional regulator; PFAM: regulatory protein MerR; SMART: regulatory protein MerR.
  
     0.594
Tpau_2183
PFAM: alpha/beta hydrolase fold; KEGG: sma:SAV_541 3-oxoadipate enol-lactone hydrolase/4-carboxymuconolactone decarboxylase.
       0.572
Tpau_1534
KEGG: cai:Caci_0913 transcriptional regulator, MerR family; PFAM: regulatory protein MerR; SMART: regulatory protein MerR.
  
     0.543
Tpau_2184
PFAM: isochorismatase hydrolase; KEGG: sen:SACE_3320 isochorismatase.
       0.521
Tpau_0636
KEGG: mjl:Mjls_2649 MerR family transcriptional regulator; PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; SMART: regulatory protein MerR.
  
     0.418
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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