Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tpau_2194PFAM: regulatory protein TetR; KEGG: nfa:nfa48140 putative transcriptional regulator. (203 aa)    
Predicted Functional Partners:
Tpau_2195
Hypothetical protein; KEGG: rop:ROP_16610 beta-hydroxyacyl-[acyl-carrier- protein] dehydratase subunit HadA.
       0.778
Tpau_3610
PFAM: molydopterin dinucleotide-binding region; molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; KEGG: nfa:nfa29460 putative oxidoreductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
  
 0.666
Tpau_2196
TIGRFAM: cobaltochelatase, CobN subunit; KEGG: rha:RHA1_ro00171 cobaltochelatase subunit CobN; PFAM: CobN/magnesium chelatase.
       0.659
Tpau_2189
PFAM: protein of unknown function DUF1330; KEGG: vap:Vapar_1007 protein of unknown function DUF1330.
 
     0.531
Tpau_2190
precorrin-3B C17-methyltransferase; KEGG: rer:RER_31440 precorrin-2 C(20)- methyltransferase/precorrin-3B C(17)-methyltransferase; TIGRFAM: precorrin-3B C17-methyltransferase; precorrin-2 C20-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase.
       0.521
Tpau_2191
KEGG: nfa:nfa31510 precorrin-8X methylmutase; PFAM: Precorrin-8X methylmutase CbiC/CobH.
       0.521
Tpau_2192
precorrin-3B synthase; KEGG: nfa:nfa31400 hypothetical protein; TIGRFAM: precorrin-3B synthase; PFAM: nitrite/sulfite reductase hemoprotein beta- component ferrodoxin domain protein.
       0.521
Tpau_2193
TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III; KEGG: nfa:nfa52820 3-oxoacyl-(acyl carrier protein) synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; 3-Oxoacyl-[acyl-carrier- protein (ACP)] synthase III; Belongs to the thiolase-like superfamily. FabH family.
       0.519
Tpau_3134
PFAM: Protein of unknown function DUF2236; KEGG: mjl:Mjls_0728 hypothetical protein.
  
     0.462
Tpau_2197
PFAM: FxsA cytoplasmic membrane protein; KEGG: mab:MAB_2204 FxsA.
       0.437
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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