Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Tpau_2209KEGG: nfa:nfa16240 hypothetical protein. (172 aa)    
Predicted Functional Partners:
Tpau_0596
PFAM: carbonic anhydrase; KEGG: rop:ROP_43660 carbonic anhydrase.
    
 
 0.774
Tpau_2210
PFAM: protein of unknown function DUF125 transmembrane; KEGG: rha:RHA1_ro04892 hypothetical protein.
       0.725
Tpau_0095
Carbonate dehydratase; KEGG: nfa:pnf1540 putative transporter; PFAM: sulphate transporter; carbonic anhydrase; Xanthine/uracil/vitamin C permease.
   
 
 0.721
Tpau_2947
PFAM: carbonic anhydrase; KEGG: rer:RER_23060 hypothetical protein.
    
 
 0.598
Tpau_2211
PFAM: iron-containing alcohol dehydrogenase; KEGG: rop:ROP_72070 iron-containing alcohol dehydrogenase.
       0.536
guaA
GMP synthase, large subunit; Catalyzes the synthesis of GMP from XMP.
  
    0.440
Tpau_2389
KEGG: mab:MAB_2352 putative 3-methyladenine DNA glycosylase; TIGRFAM: DNA-3-methyladenine glycosylase; PFAM: methylpurine-DNA glycosylase (MPG); Belongs to the DNA glycosylase MPG family.
 
   
 0.408
pheT
TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit; KEGG: rer:RER_32900 phenylalanyl-tRNA synthetase beta chain; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
       0.407
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.