Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Tpau_0689 | Tpau_2218 | PFAM: Redoxin domain protein; alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: mgi:Mflv_0052 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen. | KEGG: mkm:Mkms_1988 vitamin K epoxide reductase; PFAM: Vitamin K epoxide reductase; SMART: Vitamin K epoxide reductase. | 0.401 |
Tpau_0689 | Tpau_3002 | PFAM: Redoxin domain protein; alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: mgi:Mflv_0052 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen. | KEGG: rer:RER_23310 hypothetical protein. | 0.626 |
Tpau_2218 | Tpau_0689 | KEGG: mkm:Mkms_1988 vitamin K epoxide reductase; PFAM: Vitamin K epoxide reductase; SMART: Vitamin K epoxide reductase. | PFAM: Redoxin domain protein; alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: mgi:Mflv_0052 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen. | 0.401 |
Tpau_2218 | Tpau_2219 | KEGG: mkm:Mkms_1988 vitamin K epoxide reductase; PFAM: Vitamin K epoxide reductase; SMART: Vitamin K epoxide reductase. | PFAM: ABC transporter related; KEGG: rha:RHA1_ro03835 UvrABC system protein A. | 0.742 |
Tpau_2218 | Tpau_2220 | KEGG: mkm:Mkms_1988 vitamin K epoxide reductase; PFAM: Vitamin K epoxide reductase; SMART: Vitamin K epoxide reductase. | Hypothetical protein. | 0.566 |
Tpau_2218 | Tpau_3002 | KEGG: mkm:Mkms_1988 vitamin K epoxide reductase; PFAM: Vitamin K epoxide reductase; SMART: Vitamin K epoxide reductase. | KEGG: rer:RER_23310 hypothetical protein. | 0.754 |
Tpau_2219 | Tpau_2218 | PFAM: ABC transporter related; KEGG: rha:RHA1_ro03835 UvrABC system protein A. | KEGG: mkm:Mkms_1988 vitamin K epoxide reductase; PFAM: Vitamin K epoxide reductase; SMART: Vitamin K epoxide reductase. | 0.742 |
Tpau_2219 | Tpau_2220 | PFAM: ABC transporter related; KEGG: rha:RHA1_ro03835 UvrABC system protein A. | Hypothetical protein. | 0.596 |
Tpau_2220 | Tpau_2218 | Hypothetical protein. | KEGG: mkm:Mkms_1988 vitamin K epoxide reductase; PFAM: Vitamin K epoxide reductase; SMART: Vitamin K epoxide reductase. | 0.566 |
Tpau_2220 | Tpau_2219 | Hypothetical protein. | PFAM: ABC transporter related; KEGG: rha:RHA1_ro03835 UvrABC system protein A. | 0.596 |
Tpau_3002 | Tpau_0689 | KEGG: rer:RER_23310 hypothetical protein. | PFAM: Redoxin domain protein; alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: mgi:Mflv_0052 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen. | 0.626 |
Tpau_3002 | Tpau_2218 | KEGG: rer:RER_23310 hypothetical protein. | KEGG: mkm:Mkms_1988 vitamin K epoxide reductase; PFAM: Vitamin K epoxide reductase; SMART: Vitamin K epoxide reductase. | 0.754 |