Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Tpau_2241KEGG: svi:Svir_03790 hypothetical protein. (261 aa)    
Predicted Functional Partners:
Tpau_2243
KEGG: rer:RER_17300 Mce family protein; TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein.
  
  
 0.849
Tpau_2245
KEGG: rop:ROP_16460 putative Mce family protein; TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein.
  
  
 0.831
Tpau_2244
KEGG: rer:RER_17290 Mce family protein; TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein.
  
    0.803
Tpau_3480
Mycocerosate synthase., 6-deoxyerythronolide-B synthase; KEGG: sen:SACE_4141 type I modular polyketide synthase; PFAM: short-chain dehydrogenase/reductase SDR; Beta- ketoacyl synthase; KR domain protein; Acyl transferase; NAD-dependent epimerase/dehydratase; phosphopantetheine- binding.
  
 0.803
Tpau_2242
KEGG: nfa:nfa51010 hypothetical protein.
       0.786
Tpau_2246
KEGG: rha:RHA1_ro01969 Mce family protein; TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein.
  
  
 0.781
Tpau_0095
Carbonate dehydratase; KEGG: nfa:pnf1540 putative transporter; PFAM: sulphate transporter; carbonic anhydrase; Xanthine/uracil/vitamin C permease.
    
 
 0.757
Tpau_2247
KEGG: rop:ROP_16480 putative Mce family protein; TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein.
  
  
 0.736
Tpau_4096
KEGG: mab:MAB_1644 hypothetical protein.
    
 0.736
Tpau_1101
KEGG: sco:SCO4985 hypothetical protein; PFAM: peptidase S1 and S6 chymotrypsin/Hap; SMART: peptidase S1 and S6 chymotrypsin/Hap.
    
 0.725
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.