Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Tpau_2247KEGG: rop:ROP_16480 putative Mce family protein; TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein. (363 aa)    
Predicted Functional Partners:
Tpau_2244
KEGG: rer:RER_17290 Mce family protein; TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein.
 
 
 0.992
Tpau_2246
KEGG: rha:RHA1_ro01969 Mce family protein; TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein.
 
 
0.989
Tpau_2248
KEGG: nfa:nfa51070 putative Mce family protein; TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein.
 
 
0.988
Tpau_2249
PFAM: protein of unknown function DUF140; KEGG: rha:RHA1_ro01972 hypothetical protein.
 
 
 0.975
Tpau_2245
KEGG: rop:ROP_16460 putative Mce family protein; TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein.
 
 
 0.969
Tpau_2243
KEGG: rer:RER_17300 Mce family protein; TIGRFAM: virulence factor Mce family protein; PFAM: Mammalian cell entry related domain protein.
 
  
 0.965
Tpau_2250
PFAM: protein of unknown function DUF140; KEGG: rop:ROP_16510 putative YrbE family protein.
 
 
 0.961
Tpau_3793
PFAM: Mammalian cell entry related domain protein; KEGG: rop:ROP_18090 putative Mce family protein.
 
 
 0.904
Tpau_1245
PFAM: protein of unknown function DUF140; KEGG: nfa:nfa11140 putative YrbE family protein.
 
 
 0.893
Tpau_3790
PFAM: protein of unknown function DUF140; KEGG: rop:ROP_18120 putative YrbE family protein.
 
 
 0.892
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.