Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tpau_2257PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rop:ROP_60670 putative alcohol dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (275 aa)    
Predicted Functional Partners:
Tpau_0476
PFAM: alpha/beta hydrolase fold; KEGG: mav:MAV_4120 hydrolase, alpha/beta fold family protein, putative.
 
     0.841
Tpau_2255
PFAM: major facilitator superfamily MFS_1; KEGG: sco:SCO7346 membrane transport protein.
       0.697
Tpau_2256
PFAM: secretory lipase; KEGG: mkm:Mkms_1963 secretory lipase.
       0.697
Tpau_2230
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; Male sterility domain; NAD-dependent epimerase/dehydratase; KEGG: bja:bll4020 short chain dehydrogenase.
 
    0.696
Tpau_2701
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rme:Rmet_1333 acetoacetyl-CoA reductase.
 
    0.630
Tpau_0389
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rop:ROP_38490 putative oxidoreductase.
 
    0.625
Tpau_3600
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mjl:Mjls_5029 short chain dehydrogenase.
 
    0.596
Tpau_1853
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: nfa:nfa34120 3-ketoacyl-(acyl-carrier- protein) reductase.
 
    0.565
Tpau_3513
PFAM: FAD dependent oxidoreductase; KEGG: nfa:nfa28620 putative monooxygenase.
 
  
 0.550
Tpau_1688
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: hypothetical protein.
 
    0.523
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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