Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Tpau_2271TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; KEGG: rha:RHA1_ro05742 sugar transferase; PFAM: sugar transferase. (453 aa)    
Predicted Functional Partners:
Tpau_1584
PFAM: lipopolysaccharide biosynthesis protein; KEGG: rha:RHA1_ro05735 protein-tyrosine kinase, C- terminal.
 
  
 0.984
Tpau_2603
PFAM: lipopolysaccharide biosynthesis protein; KEGG: rop:ROP_55230 putative protein-tyrosine kinase.
 
  
 0.984
gmd
GDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.
  
  
 0.977
Tpau_0060
PFAM: glycosyl transferase group 1; glycosyl transferase family 2; KEGG: mul:MUL_4676 glycosyltransferase.
 
  
 0.961
Tpau_1062
dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
 
  
 0.868
Tpau_0061
PFAM: polysaccharide biosynthesis protein; virulence factor MVIN family protein; multi antimicrobial extrusion protein MatE; KEGG: mpa:MAP0963c hypothetical protein.
  
  
 0.777
Tpau_1581
PFAM: polysaccharide biosynthesis protein; KEGG: rha:RHA1_ro05738 MOP superfamily O-antigen transporter.
  
  
 0.777
Tpau_2600
Hypothetical protein; KEGG: cms:CMS_1589 putative surface polysaccharide flippase.
  
  
 0.777
Tpau_3770
KEGG: rer:RER_05430 non-ribosomal peptide synthetase; TIGRFAM: non-ribosomal peptide synthetase; amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; transferase hexapeptide repeat containing protein; phosphopantetheine-binding.
  
  
 0.765
Tpau_1073
ATPase-like, ParA/MinD; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
  
  
 0.757
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
Server load: low (28%) [HD]