Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
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textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tpau_2276PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: mtb:TBMG_03771 dehydrogenase. (388 aa)    
Predicted Functional Partners:
Tpau_2391
PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: msm:MSMEG_2034 aryl-alcohol dehydrogenase.
  
  
 0.749
Tpau_2883
PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rha:RHA1_ro05321 alcohol dehydrogenase.
  
  
 0.739
Tpau_2277
KEGG: rha:RHA1_ro00291 exodeoxyribonuclease III; TIGRFAM: exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase.
       0.729
Tpau_2278
Hypothetical protein.
       0.707
Tpau_3947
PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: rer:RER_26460 zinc-containing alcohol dehydrogenase.
  
  
 0.655
Tpau_3448
PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: kra:Krad_2496 alcohol dehydrogenase GroES domain protein.
  
  
 0.651
Tpau_1999
KEGG: rop:ROP_07820 8-amino-7-oxononanoate synthase; PFAM: aminotransferase class I and II; aminotransferase class-III; aromatic amino acid beta- eliminating lyase/threonine aldolase.
  
  
 0.562
Tpau_2274
PFAM: amino acid permease-associated region; Amino acid transporter transmembrane; KEGG: sco:SCO4612 amino acid transporter.
     
 0.544
Tpau_2275
PFAM: Polyketide cyclase/dehydrase; KEGG: bcv:Bcav_2607 activator of HSP90 ATPase 1 family protein.
       0.538
gcvP
Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
  
  
 0.506
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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