Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tpau_2285KEGG: ach:Achl_2309 hypothetical protein. (177 aa)    
Predicted Functional Partners:
Tpau_2286
KEGG: bpm:BURPS1710b_A1004 MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR.
       0.693
Tpau_2287
PFAM: band 7 protein; KEGG: rer:RER_05390 hypothetical protein.
       0.688
Tpau_2288
KEGG: rer:RER_05400 hypothetical protein.
       0.532
Tpau_1961
Hypothetical protein.
  
     0.448
Tpau_0362
KEGG: rop:ROP_11180 hypothetical protein.
 
     0.439
Tpau_2771
KEGG: rop:ROP_09710 sulfite reductase; PFAM: nitrite and sulphite reductase 4Fe-4S region; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein.
  
   
 0.412
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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