Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tpau_2293Protein of unknown function DUF222; KEGG: rha:RHA1_ro02511 hypothetical protein; PFAM: protein of unknown function DUF222; HNH endonuclease; SMART: HNH nuclease. (540 aa)    
Predicted Functional Partners:
Tpau_0807
HNH endonuclease; KEGG: mav:MAV_4456 13e12 repeat-containing protein; PFAM: HNH endonuclease; SMART: HNH nuclease.
  
    0.766
Tpau_1708
HNH endonuclease; KEGG: mmi:MMAR_2226 13e12 repeat-containing protein; PFAM: HNH endonuclease; SMART: HNH nuclease.
  
    0.735
Tpau_1248
PFAM: ATP synthase I; KEGG: mmi:MMAR_4094 hypothetical protein.
  
     0.698
Tpau_1406
KEGG: mab:MAB_0672c hypothetical protein.
  
     0.698
Tpau_1759
SMART: HNH nuclease; KEGG: mpa:MAP3151 hypothetical protein.
  
    0.687
Tpau_0390
HNH endonuclease; KEGG: mjl:Mjls_0290 hypothetical protein; PFAM: HNH endonuclease; SMART: HNH nuclease.
  
    0.685
Tpau_3187
SMART: HNH nuclease; KEGG: mjl:Mjls_0290 hypothetical protein.
  
    0.680
Tpau_3052
HNH endonuclease; KEGG: mab:MAB_1907 hypothetical protein; PFAM: HNH endonuclease; SMART: HNH nuclease.
  
    0.679
Tpau_1140
SMART: HNH nuclease; KEGG: mab:MAB_1907 hypothetical protein.
  
    0.671
Tpau_0538
SMART: HNH nuclease; KEGG: mbt:JTY_3094 hypothetical protein.
  
    0.670
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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