Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tpau_2313PFAM: Penicillinase repressor; KEGG: mav:MAV_2869 transcriptional repressor, CopY family protein. (129 aa)    
Predicted Functional Partners:
Tpau_2314
PFAM: peptidase M48 Ste24p; KEGG: rer:RER_31030 hypothetical protein.
 
 
  0.995
Tpau_0674
PFAM: Heavy metal transport/detoxification protein; KEGG: svi:Svir_36750 copper chaperone.
  
  
 0.680
Tpau_2316
TIGRFAM: IMP dehydrogenase family protein; KEGG: mgi:Mflv_3360 inosine 5-monophosphate dehydrogenase; PFAM: IMP dehydrogenase/GMP reductase; CBS domain containing protein.
 
     0.625
Tpau_4085
PFAM: Protein of unknown function DUF2236; KEGG: msm:MSMEG_6722 hypothetical protein.
  
     0.487
Tpau_2318
PFAM: protein of unknown function DUF21; CBS domain containing protein; KEGG: nfa:nfa25120 hypothetical protein.
     
 0.484
Tpau_2319
KEGG: nfa:nfa25070 hypothetical protein.
       0.477
Tpau_2315
KEGG: nfa:nfa18640 hypothetical protein.
       0.469
Tpau_4180
PFAM: Protein of unknown function DUF2236; KEGG: msm:MSMEG_3590 hypothetical protein.
  
     0.462
Tpau_2311
PFAM: thioesterase superfamily protein; KEGG: rer:RER_31100 thioesterase.
       0.449
Tpau_2312
Phage shock protein C, PspC; PFAM: PspC domain protein; KEGG: rer:RER_48860 hypothetical protein.
       0.415
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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