Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tpau_2319KEGG: nfa:nfa25070 hypothetical protein. (296 aa)    
Predicted Functional Partners:
Tpau_2318
PFAM: protein of unknown function DUF21; CBS domain containing protein; KEGG: nfa:nfa25120 hypothetical protein.
       0.836
Tpau_2317
PFAM: protein of unknown function DUF21; CBS domain containing protein; transporter-associated region; KEGG: rer:RER_30970 hypothetical protein.
       0.794
Tpau_2316
TIGRFAM: IMP dehydrogenase family protein; KEGG: mgi:Mflv_3360 inosine 5-monophosphate dehydrogenase; PFAM: IMP dehydrogenase/GMP reductase; CBS domain containing protein.
       0.614
Tpau_2320
PFAM: Peptidase M23; KEGG: sco:SCO0974 secreted protein.
       0.532
Tpau_2314
PFAM: peptidase M48 Ste24p; KEGG: rer:RER_31030 hypothetical protein.
       0.488
Tpau_2313
PFAM: Penicillinase repressor; KEGG: mav:MAV_2869 transcriptional repressor, CopY family protein.
       0.477
Tpau_2311
PFAM: thioesterase superfamily protein; KEGG: rer:RER_31100 thioesterase.
       0.405
Tpau_2315
KEGG: nfa:nfa18640 hypothetical protein.
       0.404
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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