Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Tpau_2327TIGRFAM: cyclic peptide transporter; PFAM: ABC transporter related; KEGG: nfa:nfa49280 putative ABC transporter ATP- binding protein; SMART: AAA ATPase. (579 aa)    
Predicted Functional Partners:
Tpau_3693
Amino acid adenylation domain protein; KEGG: rop:ROP_20370 non-ribosomal peptide synthetase; TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; Thioesterase; phosphopantetheine-binding; condensation domain protein.
 
  
 0.925
Tpau_2325
PFAM: cytochrome b5; fatty acid desaturase; KEGG: nfa:nfa49300 hypothetical protein.
 
     0.878
Tpau_2326
PFAM: chalcone and stilbene synthase domain protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; KEGG: nfa:nfa49290 putative type III polyketide synthase.
 
   
 0.845
Tpau_3476
KEGG: stp:Strop_2778 beta-ketoacyl synthase; PFAM: Beta-ketoacyl synthase; Acyl transferase; KR domain protein; Thioesterase; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding.
 
  
 0.814
Tpau_3985
PFAM: MbtH domain protein; KEGG: mjl:Mjls_3474 MbtH domain-containing protein.
 
  
 0.802
Tpau_0175
PFAM: Beta-ketoacyl synthase; Acyl transferase; Thioesterase; phosphopantetheine-binding; KEGG: rha:RHA1_ro04065 polyketide synthase.
 
  
 0.771
Tpau_3987
TIGRFAM: amino acid adenylation domain protein; daunorubicin resistance ABC transporter ATPase subunit; PFAM: AMP-dependent synthetase and ligase; Thioesterase; ABC transporter related; phosphopantetheine- binding; condensation domain protein; KEGG: rer:RER_30610 non-ribosomal peptide synthetase; SMART: AAA ATPase.
 
  
0.667
glcB
Malate synthase G; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily.
       0.636
Tpau_2329
KEGG: lxx:Lxx20650 hypothetical protein.
       0.636
Tpau_3691
L-lysine 6-monooxygenase (NADPH); KEGG: rer:RER_09790 L-ornithine N5-oxygenase.
 
  
 0.634
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.