Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Tpau_2352KEGG: mab:MAB_4008c hypothetical protein. (150 aa)    
Predicted Functional Partners:
Tpau_2353
KEGG: msm:MSMEG_5564 NAD(P)H dehydrogenase, quinone family protein; PFAM: NAD(P)H dehydrogenase (quinone).
     
 0.774
Tpau_0643
KEGG: mjl:Mjls_5757 hypothetical protein.
  
     0.763
fgd
Glucose-6-phosphate dehydrogenase, F420- dependent; Catalyzes the coenzyme F420-dependent oxidation of glucose 6- phosphate (G6P) to 6-phosphogluconolactone.
  
   
 0.763
Tpau_0956
KEGG: nfa:nfa48300 hypothetical protein.
  
     0.759
Tpau_3812
Putative F420-dependent oxidoreductase; KEGG: saq:Sare_2798 luciferase family protein; TIGRFAM: putative F420-dependent oxidoreductase; PFAM: Luciferase-like, subgroup.
  
     0.750
Tpau_1183
LPPG domain protein containing protein; KEGG: rop:ROP_63740 LPPG--FO 2-phopspho-L-lactate transferase; TIGRFAM: LPPG domain protein containing protein; PFAM: protein of unknown function UPF0052 and CofD.
 
   
 0.742
Tpau_3697
Putative F420-dependent oxidoreductase; KEGG: mgi:Mflv_0268 luciferase family protein; TIGRFAM: probable F420-dependent oxidoreductase; PFAM: Luciferase-like, subgroup.
  
   
 0.740
Tpau_4198
PFAM: Luciferase-like, subgroup; KEGG: saq:Sare_0082 luciferase family protein.
  
     0.729
Tpau_1995
KEGG: nfa:nfa34240 putative oxidoreductase; TIGRFAM: putative F420-dependent oxidoreductase; PFAM: Luciferase-like, subgroup.
  
     0.721
Tpau_1182
KEGG: mav:MAV_4225 F420-0--gamma-glutamyl ligase; TIGRFAM: F420 biosynthesis protein FbiB, C-terminal domain; F420-dependent oxidoreductase; PFAM: protein of unknown function DUF129; nitroreductase.
 
   
 0.704
Your Current Organism:
Tsukamurella paurometabola
NCBI taxonomy Id: 521096
Other names: T. paurometabola DSM 20162, Tsukamurella paurometabola ATCC 8368, Tsukamurella paurometabola DSM 20162, Tsukamurella paurometabola str. DSM 20162, Tsukamurella paurometabola strain DSM 20162
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